Stephen Smith

• Hand classification of fMRI ICA noise components.

  Journal article

  Griffanti L. et al, (2017), Neuroimage, 154, 188 - 205

• Tradeoffs in pushing the spatial resolution of fMRI for the 7T Human Connectome Project.

  Journal article

  T Vu A. et al, (2017), Neuroimage, 154, 23 - 32

• Heterogeneous fractionation profiles of meta-analytic coactivation networks.

  Journal article

  Laird AR. et al, (2017), Neuroimage, 149, 424 - 435

• Studying neuroanatomy using MRI.

  Journal article

  Lerch JP. et al, (2017), Nat Neurosci, 20, 314 - 326

• Accelerating functional MRI using fixed-rank approximations and radial-cartesian sampling.

  Journal article

  Chiew M. et al, (2016), Magn Reson Med, 76, 1825 - 1836

• Faster permutation inference in brain imaging.

  Journal article

  Winkler AM. et al, (2016), Neuroimage, 141, 502 - 516

• Multimodal population brain imaging in the UK Biobank prospective epidemiological study.

  Journal article

  Miller KL. et al, (2016), Nat Neurosci, 19, 1523 - 1536

• How reliable are MEG resting-state connectivity metrics?

  Journal article

  Colclough GL. et al, (2016), Neuroimage, 138, 284 - 293

• Statistical analysis of fMRI data

  Chapter

  Woolrich MW. et al, (2016), Neuromethods, 119, 183 - 239

• The Human Connectome Project's neuroimaging approach.

  Journal article

  Glasser MF. et al, (2016), Nat Neurosci, 19, 1175 - 1187

• A multi-modal parcellation of human cerebral cortex.

  Journal article

  Glasser MF. et al, (2016), Nature, 536, 171 - 178

• Task-free MRI predicts individual differences in brain activity during task performance.

  Journal article

  Tavor I. et al, (2016), Science, 352, 216 - 220

• Non-parametric combination and related permutation tests for neuroimaging.

  Journal article

  Winkler AM. et al, (2016), Hum Brain Mapp, 37, 1486 - 1511

• The brain functional connectome is robustly altered by lack of sleep.

  Journal article

  Kaufmann T. et al, (2016), Neuroimage, 127, 324 - 332

• Linking cognition to brain connectivity.

  Journal article

  Smith S., (2016), Nat Neurosci, 19, 7 - 9

• Multi-level block permutation.

  Journal article

  Winkler AM. et al, (2015), Neuroimage, 123, 253 - 268

• A positive-negative mode of population covariation links brain connectivity, demographics and behavior.

  Journal article

  Smith SM. et al, (2015), Nat Neurosci, 18, 1565 - 1567

• Disintegration of Sensorimotor Brain Networks in Schizophrenia.

  Journal article

  Kaufmann T. et al, (2015), Schizophr Bull, 41, 1326 - 1335

• Resting-state networks

  Chapter

  Niazy RK. et al, (2015), fMRI: From Nuclear Spins to Brain Functions, 387 - 425

• Functional Connectivity under Anticipation of Shock: Correlates of Trait Anxious Affect versus Induced Anxiety.

  Journal article

  Bijsterbosch J. et al, (2015), J Cogn Neurosci, 27, 1840 - 1853

• A symmetric multivariate leakage correction for MEG connectomes.

  Journal article

  Colclough GL. et al, (2015), Neuroimage, 117, 439 - 448

• k-t FASTER: Acceleration of functional MRI data acquisition using low rank constraints.

  Journal article

  Chiew M. et al, (2015), Magn Reson Med, 74, 353 - 364

• Brain atrophy in cognitively impaired elderly: the importance of long-chain ω-3 fatty acids and B vitamin status in a randomized controlled trial.

  Journal article

  Jernerén F. et al, (2015), Am J Clin Nutr, 102, 215 - 221

• Attentional load modulates large-scale functional brain connectivity beyond the core attention networks.

  Journal article

  Alnæs D. et al, (2015), Neuroimage, 109, 260 - 272

• Omega-3 Fatty Acids Modify Treatment Effect of High-Dose B Vitamins in Cognitively Impaired Elderly

  Journal article

  Jerneren F. et al, (2015), FASEB JOURNAL, 29

• Large-scale probabilistic functional modes from resting state fMRI.

  Journal article

  Harrison SJ. et al, (2015), Neuroimage, 109, 217 - 231

• Tract-Based Spatial Statistics and Other Approaches for Cross-Subject Comparison of Local Diffusion MRI Parameters

  Chapter

  Smith SM. et al, (2015), Brain Mapping: An Encyclopedic Reference, 1, 437 - 464

• Learning to identify CNS drug action and efficacy using multistudy fMRI data.

  Journal article

  Duff EP. et al, (2015), Sci Transl Med, 7

• Effective artifact removal in resting state fMRI data improves detection of DMN functional connectivity alteration in Alzheimer's disease.

  Journal article

  Griffanti L. et al, (2015), Front Hum Neurosci, 9

• ICA-based artifact removal diminishes scan site differences in multi-center resting-state fMRI.

  Journal article

  Feis RA. et al, (2015), Front Neurosci, 9

• A common brain network links development, aging, and vulnerability to disease.

  Journal article

  Douaud G. et al, (2014), Proc Natl Acad Sci U S A, 111, 17648 - 17653

• First steps in using machine learning on fMRI data to predict intrusive memories of traumatic film footage.

  Journal article

  Clark IA. et al, (2014), Behav Res Ther, 62, 37 - 46

• First steps in using machine learning on fMRI data to predict intrusive memories of traumatic film footage

  Journal article

  Clark IA. et al, (2014), Behaviour Research and Therapy, 62, 37 - 46

• Group-PCA for very large fMRI datasets.

  Journal article

  Smith SM. et al, (2014), Neuroimage, 101, 738 - 749

• Group-PCA for very large fMRI datasets

  Journal article

  Smith SM. et al, (2014), NeuroImage, 101, 738 - 749

• MSM: a new flexible framework for Multimodal Surface Matching.

  Journal article

  Robinson EC. et al, (2014), Neuroimage, 100, 414 - 426

• Optimizing full-brain coverage in human brain MRI through population distributions of brain size.

  Journal article

  Mennes M. et al, (2014), Neuroimage, 98, 513 - 520

• ICA-based artefact removal and accelerated fMRI acquisition for improved resting state network imaging.

  Journal article

  Griffanti L. et al, (2014), Neuroimage, 95, 232 - 247

• Study protocol: The Whitehall II imaging sub-study.

  Journal article

  Filippini N. et al, (2014), BMC Psychiatry, 14

• Permutation inference for the general linear model.

  Journal article

  Winkler AM. et al, (2014), Neuroimage, 92, 381 - 397

• Poor Sleep Quality is Associated with Reduced White Matter Integrity in Community-Dwelling Older Adults

  Journal article

  Sexton C. et al, (2014), BIOLOGICAL PSYCHIATRY, 75, 171S - 171S

• Automatic denoising of functional MRI data: combining independent component analysis and hierarchical fusion of classifiers.

  Journal article

  Salimi-Khorshidi G. et al, (2014), Neuroimage, 90, 449 - 468

• Resting state correlates of subdimensions of anxious affect

  Journal article

  Bijsterbosch J. et al, (2014), Journal of Cognitive Neuroscience, 26, 914 - 926

• Resting state correlates of subdimensions of anxious affect.

  Journal article

  Bijsterbosch J. et al, (2014), J Cogn Neurosci, 26, 914 - 926

• Fast transient networks in spontaneous human brain activity.

  Journal article

  Baker AP. et al, (2014), Elife, 3

• Local GABA concentration is related to network-level resting functional connectivity.

  Journal article

  Stagg CJ. et al, (2014), Elife, 3

• Increased resting state functional connectivity in the default mode network in recovered anorexia nervosa.

  Journal article

  Cowdrey FA. et al, (2014), Hum Brain Mapp, 35, 483 - 491

• Increased resting state functional connectivity in the default mode network in recovered anorexia nervosa

  Journal article

  Cowdrey FA. et al, (2014), Human Brain Mapping, 35, 483 - 491

• MVPA to enhance the study of rare cognitive events: An investigation of experimental PTSD

  Conference paper

  Niehaus KE. et al, (2014), Proceedings - 2014 International Workshop on Pattern Recognition in Neuroimaging, PRNI 2014

• Optimizing full-brain coverage in human brain MRI through population distributions of brain size

  Journal article

  Mennes M. et al, (2014), NeuroImage, 98, 513 - 520

• Functional connectomics from resting-state fMRI.

  Journal article

  Smith SM. et al, (2013), Trends Cogn Sci, 17, 666 - 682

• Evaluation of slice accelerations using multiband echo planar imaging at 3T

  Journal article

  Xu J. et al, (2013), NeuroImage, 83, 991 - 1001

• Functional connectomics from resting-state fMRI

  Journal article

  Smith SM. et al, (2013), Trends in Cognitive Sciences, 17, 666 - 682

• Evaluation of slice accelerations using multiband echo planar imaging at 3 T.

  Journal article

  Xu J. et al, (2013), Neuroimage, 83, 991 - 1001

• Resting functional connectivity reveals residual functional activity in Alzheimer's disease.

  Conference paper

  Zamboni G. et al, (2013), J Neurol Neurosurg Psychiatry, 84

• Cross-Subject Comparison of Local Diffusion MRI Parameters

  Journal article

  Smith SM. et al, (2013), 209 - 239

• Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project.

  Journal article

  Uğurbil K. et al, (2013), Neuroimage, 80, 80 - 104

• Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project

  Journal article

  Uǧurbil K. et al, (2013), NeuroImage, 80, 80 - 104

• Function in the human connectome: task-fMRI and individual differences in behavior.

  Journal article

  Barch DM. et al, (2013), Neuroimage, 80, 169 - 189

• The WU-Minn Human Connectome Project: an overview.

  Journal article

  Van Essen DC. et al, (2013), Neuroimage, 80, 62 - 79

• Resting-state fMRI in the Human Connectome Project.

  Journal article

  Smith SM. et al, (2013), Neuroimage, 80, 144 - 168

• Function in the human connectome: Task-fMRI and individual differences in behavior

  Journal article

  Barch DM. et al, (2013), NeuroImage, 80, 169 - 189

• The WU-Minn Human Connectome Project: An overview

  Journal article

  Van Essen DC. et al, (2013), NeuroImage, 80, 62 - 79

• Introduction to the NeuroImage special issue "Mapping the Connectome".

  Journal article

  Smith S., (2013), Neuroimage, 80

• Utility of partial correlation for characterising brain dynamics: MVPA-based assessment of regularisation and network selection

  Journal article

  Duff E. et al, (2013), Proceedings - 2013 3rd International Workshop on Pattern Recognition in Neuroimaging, PRNI 2013, 58 - 61

• Resting functional connectivity reveals residual functional activity in Alzheimer's disease.

  Journal article

  Zamboni G. et al, (2013), Biol Psychiatry, 74, 375 - 383

• Resting functional connectivity reveals residual functional activity in Alzheimer's disease

  Journal article

  Zamboni G. et al, (2013), Biological Psychiatry, 74, 375 - 383

• Spatially constrained hierarchical parcellation of the brain with resting-state fMRI.

  Journal article

  Blumensath T. et al, (2013), Neuroimage, 76, 313 - 324

• Improving alignment in Tract-based spatial statistics: evaluation and optimization of image registration.

  Journal article

  de Groot M. et al, (2013), Neuroimage, 76, 400 - 411

• Preventing Alzheimer's disease-related gray matter atrophy by B-vitamin treatment.

  Journal article

  Douaud G. et al, (2013), Proc Natl Acad Sci U S A, 110, 9523 - 9528

• Brain microstructure reveals early abnormalities more than two years prior to clinical progression from mild cognitive impairment to Alzheimer's disease.

  Journal article

  Douaud G. et al, (2013), J Neurosci, 33, 2147 - 2155

• What is the most interesting part of the brain?

  Journal article

  Behrens TE. et al, (2013), Trends Cogn Sci, 17, 2 - 4

• Pairwise likelihood ratios for estimation of non-gaussian structural ecuation models

  Journal article

  Hyvarinen A. and Smith SM., (2013), Journal of Machine Learning Research, 14, 111 - 152

• Multimodal surface matching: fast and generalisable cortical registration using discrete optimisation.

  Journal article

  Robinson EC. et al, (2013), Inf Process Med Imaging, 23, 475 - 486

• ICA model order selection of task co-activation networks.

  Journal article

  Ray KL. et al, (2013), Front Neurosci, 7

• Spatial vs. Temporal Features in ICA of Resting-State fMRI - A Quantitative and Qualitative Investigation in the Context of Response Inhibition.

  Journal article

  Tian L. et al, (2013), PLoS One, 8

• Benefits of multi-modal fusion analysis on a large-scale dataset: life-span patterns of inter-subject variability in cortical morphometry and white matter microstructure.

  Journal article

  Groves AR. et al, (2012), Neuroimage, 63, 365 - 380

• The Human Connectome Project: a data acquisition perspective.

  Journal article

  Van Essen DC. et al, (2012), Neuroimage, 62, 2222 - 2231

• The Human Connectome Project: A data acquisition perspective

  Journal article

  Van Essen DC. et al, (2012), NeuroImage, 62, 2222 - 2231

• An anatomically comprehensive atlas of the adult human brain transcriptome.

  Journal article

  Hawrylycz MJ. et al, (2012), Nature, 489, 391 - 399

• FSL.

  Journal article

  Jenkinson M. et al, (2012), Neuroimage, 62, 782 - 790

• FSL

  Journal article

  Jenkinson M. et al, (2012), NeuroImage, 62, 782 - 790

• The future of FMRI connectivity.

  Journal article

  Smith SM., (2012), Neuroimage, 62, 1257 - 1266

• Tools of the trade: psychophysiological interactions and functional connectivity.

  Journal article

  O'Reilly JX. et al, (2012), Soc Cogn Affect Neurosci, 7, 604 - 609

• Language networks in anophthalmia: maintained hierarchy of processing in 'visual' cortex.

  Journal article

  Watkins KE. et al, (2012), Brain, 135, 1566 - 1577

• Overview of fMRI analysis

  Chapter

  Smith SM., (2012), Functional Magnetic Resonance Imaging: An Introduction to Methods

• Functional magnetic resonance imaging: An introduction to methods

  Book

  Jezzard P. et al, (2012), 1 - 426

• Preface

  Book

  Jezzard P. et al, (2012)

• Preparing fMRI data for statistical analysis

  Chapter

  Smith SM., (2012), Functional Magnetic Resonance Imaging: An Introduction to Methods

• Spontaneous blood oxygenation level-dependent fMRI signal is modulated by behavioral state and correlates with evoked response in sensorimotor cortex: a 7.0-T fMRI study.

  Journal article

  Donahue MJ. et al, (2012), Hum Brain Mapp, 33, 511 - 522

• Spontaneous blood oxygenation level-dependent fMRI signal is modulated by behavioral state and correlates with evoked response in sensorimotor cortex: A 7.0-T fMRI study

  Journal article

  Donahue MJ. et al, (2012), Human Brain Mapping, 33, 511 - 522

• Task-driven ICA feature generation for accurate and interpretable prediction using fMRI.

  Journal article

  Duff EP. et al, (2012), Neuroimage, 60, 189 - 203

• Temporally-independent functional modes of spontaneous brain activity.

  Journal article

  Smith SM. et al, (2012), Proc Natl Acad Sci U S A, 109, 3131 - 3136

• Temporally-independent functional modes of spontaneous brain activity

  Journal article

  Smith SM. et al, (2012), Proceedings of the National Academy of Sciences of the United States of America, 109, 3131 - 3136

• Age-related adaptations of brain function during a memory task are also present at rest.

  Journal article

  Filippini N. et al, (2012), Neuroimage, 59, 3821 - 3828

• The danger of systematic bias in group-level FMRI-lag-based causality estimation.

  Journal article

  Smith SM. et al, (2012), Neuroimage, 59, 1228 - 1229

• The effects of APOE on the functional architecture of the resting brain.

  Journal article

  Trachtenberg AJ. et al, (2012), Neuroimage, 59, 565 - 572

• Resting-state FMRI single subject cortical parcellation based on region growing.

  Conference paper

  Blumensath T. et al, (2012), Med Image Comput Comput Assist Interv, 15, 188 - 195

• Language networks in anophthalmia: Maintained hierarchy of processing in 'visual' cortex

  Journal article

  Watkins KE. et al, (2012), Brain, 135, 1566 - 1577

• Temporally-independent functional modes of spontaneous brain activity

  Journal article

  Smith SM. et al, (2012), Proceedings of the National Academy of Sciences of the United States of America, 109, 3131 - 3136

• Resting-state FMRI single subject cortical parcellation based on region growing

  Conference paper

  Blumensath T. et al, (2012), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 7511 LNCS, 188 - 195

• Behavioral interpretations of intrinsic connectivity networks.

  Journal article

  Laird AR. et al, (2011), J Cogn Neurosci, 23, 4022 - 4037

• Investigating the electrophysiological basis of resting state networks using magnetoencephalography.

  Journal article

  Brookes MJ. et al, (2011), Proc Natl Acad Sci U S A, 108, 16783 - 16788

• Using Gaussian-process regression for meta-analytic neuroimaging inference based on sparse observations.

  Journal article

  Salimi-Khorshidi G. et al, (2011), IEEE Trans Med Imaging, 30, 1401 - 1416

• Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner.

  Journal article

  Miller KL. et al, (2011), Neuroimage, 57, 167 - 181

• A Bayesian model of shape and appearance for subcortical brain segmentation.

  Journal article

  Patenaude B. et al, (2011), Neuroimage, 56, 907 - 922

• Towards a neuroimaging biomarker for amyotrophic lateral sclerosis.

  Journal article

  Turner MR. et al, (2011), Lancet Neurol, 10, 400 - 403

• DTI measures in crossing-fibre areas: increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease.

  Journal article

  Douaud G. et al, (2011), Neuroimage, 55, 880 - 890

• Linked independent component analysis for multimodal data fusion.

  Journal article

  Groves AR. et al, (2011), Neuroimage, 54, 2198 - 2217

• Adjusting the effect of nonstationarity in cluster-based and TFCE inference.

  Journal article

  Salimi-Khorshidi G. et al, (2011), Neuroimage, 54, 2006 - 2019

• Network modelling methods for FMRI.

  Journal article

  Smith SM. et al, (2011), Neuroimage, 54, 875 - 891

• Spectral characteristics of resting state networks.

  Journal article

  Niazy RK. et al, (2011), Prog Brain Res, 193, 259 - 276

• Differential effects of the APOE genotype on brain function across the lifespan.

  Journal article

  Filippini N. et al, (2011), Neuroimage, 54, 602 - 610

• Multiplexed echo planar imaging for sub-second whole brain FMRI and fast diffusion imaging.

  Journal article

  Feinberg DA. et al, (2010), PLoS One, 5

• Genetics of microstructure of cerebral white matter using diffusion tensor imaging.

  Journal article

  Kochunov P. et al, (2010), Neuroimage, 53, 1109 - 1116

• PREDICTING BRAIN ATROPHY AT 1 YEAR BY BASELINE MULTIMODAL MRI DATA

  Conference paper

  Tarunya A. et al, (2010), JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 81, E42 - E42

• DIRECT COMPARISON OF MULTIPLE NONLESIONAL IMAGING MEASURES TO ASSESS THEIR POWER TO MEASURE TREATMENT EFFECTS OVER 1 YEAR IN PRIMARY PROGRESSIVE MULTIPLE SCLEROSIS

  Conference paper

  Arun T. et al, (2010), JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 81, E52 - E53

• Homocysteine-lowering by B vitamins slows the rate of accelerated brain atrophy in mild cognitive impairment: a randomized controlled trial.

  Journal article

  Smith AD. et al, (2010), PLoS One, 5

• Age-related changes in grey and white matter structure throughout adulthood.

  Journal article

  Giorgio A. et al, (2010), Neuroimage, 51, 943 - 951

• Resting state networks change in clinically isolated syndrome.

  Journal article

  Roosendaal SD. et al, (2010), Brain, 133, 1612 - 1621

• Erratum to Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease [NeuroImage, 49, (2010), 1-8]

  Conference paper

  Zarei M. et al, (2010), NeuroImage, 51

• Genetic Control Over the Default Mode Network

  Conference paper

  Glahn DC. et al, (2010), BIOLOGICAL PSYCHIATRY, 67, 12S - 13S

• Toward discovery science of human brain function.

  Journal article

  Biswal BB. et al, (2010), Proc Natl Acad Sci U S A, 107, 4734 - 4739

• Asymmetries of the balanced SSFP profile. Part II: white matter.

  Journal article

  Miller KL. et al, (2010), Magn Reson Med, 63, 396 - 406

• Relationships of brain white matter microstructure with clinical and MR measures in relapsing-remitting multiple sclerosis.

  Journal article

  Giorgio A. et al, (2010), J Magn Reson Imaging, 31, 309 - 316

• Genetic control over the resting brain.

  Journal article

  Glahn DC. et al, (2010), Proc Natl Acad Sci U S A, 107, 1223 - 1228

• Crossing fibres in tract-based spatial statistics.

  Journal article

  Jbabdi S. et al, (2010), Neuroimage, 49, 249 - 256

• Combining shape and connectivity analysis: an MRI study of thalamic degeneration in Alzheimer's disease.

  Journal article

  Zarei M. et al, (2010), Neuroimage, 49, 1 - 8

• An evaluation of four automatic methods of segmenting the subcortical structures in the brain (vol 47, pg 1435, 2009)

  Conference paper

  Babalola KO. et al, (2010), NEUROIMAGE, 49, 1152 - 1152

• Homocysteine-lowering by B vitamins slows the rate of accelerated brain atrophy in mild cognitive impairment: a randomized controlled trial.

  Journal article

  Smith AD. et al, (2010), PloS one, 5

• Corrigendum to "An evaluation of four automatic methods of segmenting the subcortical structures in the brain" [NeuroImage 47 (2009) 1435-1447] (DOI:10.1016/j.neuroimage.2009.05.029)

  Journal article

  Babalola KO. et al, (2010), NeuroImage, 49

• Advances and pitfalls in the analysis and interpretation of resting-state FMRI data.

  Journal article

  Cole DM. et al, (2010), Front Syst Neurosci, 4

• Longitudinal changes in grey and white matter during adolescence.

  Journal article

  Giorgio A. et al, (2010), Neuroimage, 49, 94 - 103

• Methods for tractography-driven surface registration of brain structures.

  Journal article

  Petrović A. et al, (2009), Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 12, 705 - 712

• Cross-subject comparison of local diffusion MRI parameters

  Journal article

  Smith SM. and Kindlmann G., (2009), 147 - 174

• Adjusting the neuroimaging statistical inferences for nonstationarity.

  Journal article

  Salimi-Khorshidi G. et al, (2009), Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 12, 992 - 999

• Sampling and visualizing creases with scale-space particles.

  Journal article

  Kindlmann GL. et al, (2009), IEEE Trans Vis Comput Graph, 15, 1415 - 1424

• Statistical analysis of fMRI data

  Book

  Woolrich MW. et al, (2009), 41, 179 - 236

• An evaluation of four automatic methods of segmenting the subcortical structures in the brain.

  Journal article

  Babalola KO. et al, (2009), Neuroimage, 47, 1435 - 1447

• Schizophrenia delays and alters maturation of the brain in adolescence.

  Journal article

  Douaud G. et al, (2009), Brain, 132, 2437 - 2448

• Correspondence of the brain's functional architecture during activation and rest.

  Journal article

  Smith SM. et al, (2009), Proc Natl Acad Sci U S A, 106, 13040 - 13045

• Bayesian deconvolution of fMRI data using bilinear dynamical systems (vol 42, pg 1381, 2008)

  Conference paper

  Makni S. et al, (2009), NEUROIMAGE, 46, 343 - 343

• Erratum to "Bayesian deconvolution of fMRI data using bilinear dynamical systems" [NeuroImage 42 (2008) 1381-1396] (DOI:10.1016/j.neuroimage.2008.05.052)

  Journal article

  Makni S. et al, (2009), NeuroImage, 46

• Distinct patterns of brain activity in young carriers of the APOE-epsilon4 allele.

  Journal article

  Filippini N. et al, (2009), Proc Natl Acad Sci U S A, 106, 7209 - 7214

• Meta-analysis of neuroimaging data: a comparison of image-based and coordinate-based pooling of studies.

  Journal article

  Salimi-Khorshidi G. et al, (2009), Neuroimage, 45, 810 - 823

• White matter tract integrity in aging and Alzheimer's disease.

  Journal article

  Damoiseaux JS. et al, (2009), Hum Brain Mapp, 30, 1051 - 1059

• Performance evaluation of ensemble empirical mode decomposition

  Journal article

  Niazy RK. et al, (2009), Advances in Adaptive Data Analysis, 1, 231 - 242

• BEFORE AND AFTER THE ACUTE MS LESION: A LONGITUDINAL DTI STUDY

  Conference paper

  Giorgio A. et al, (2009), JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 80, 463 - 463

• Regional white matter integrity differentiates between vascular dementia and Alzheimer disease.

  Journal article

  Zarei M. et al, (2009), Stroke, 40, 773 - 779

• Bayesian analysis of neuroimaging data in FSL.

  Journal article

  Woolrich MW. et al, (2009), Neuroimage, 45, S173 - S186

• Investigation of white matter pathology in ALS and PLS using tract-based spatial statistics.

  Journal article

  Ciccarelli O. et al, (2009), Hum Brain Mapp, 30, 615 - 624

• Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference.

  Journal article

  Smith SM. and Nichols TE., (2009), Neuroimage, 44, 83 - 98

• Model-free group analysis shows altered BOLD FMRI networks in dementia.

  Journal article

  Rombouts SA. et al, (2009), Hum Brain Mapp, 30, 256 - 266

• Methods for tractography-driven surface registration of brain structures.

  Conference paper

  Petrović A. et al, (2009), Med Image Comput Comput Assist Interv, 12, 705 - 712

• Adjusting the neuroimaging statistical inferences for nonstationarity.

  Conference paper

  Salimi-Khorshidi G. et al, (2009), Med Image Comput Comput Assist Interv, 12, 992 - 999

• Evidence for abnormalities of cortical development in adolescent-onset schizophrenia.

  Journal article

  Voets NL. et al, (2008), Neuroimage, 43, 665 - 675

• Comparison and evaluation of segmentation techniques for subcortical structures in brain MRI

  Conference paper

  Babalola KO. et al, (2008), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 5241 LNCS, 409 - 416

• Brain atrophy assessment in multiple sclerosis: importance and limitations.

  Journal article

  Giorgio A. et al, (2008), Neuroimaging Clin N Am, 18, 675 - xi

• Bayesian deconvolution of [corrected] fMRI data using bilinear dynamical systems.

  Journal article

  Makni S. et al, (2008), Neuroimage, 42, 1381 - 1396

• Vitamin B12 status and rate of brain volume loss in community-dwelling elderly.

  Journal article

  Vogiatzoglou A. et al, (2008), Neurology, 71, 826 - 832

• Reproducibility of fMRI in the clinical setting: implications for trial designs.

  Journal article

  Bosnell R. et al, (2008), Neuroimage, 42, 603 - 610

• Reduced resting-state brain activity in the "default network" in normal aging.

  Journal article

  Damoiseaux JS. et al, (2008), Cereb Cortex, 18, 1856 - 1864

• Impairment of movement-associated brain deactivation in multiple sclerosis: further evidence for a functional pathology of interhemispheric neuronal inhibition.

  Journal article

  Manson SC. et al, (2008), Exp Brain Res, 187, 25 - 31

• Amygdala enlargement and shape distortion in bipolar disorder

  Conference paper

  Glahn DC. et al, (2008), BIOLOGICAL PSYCHIATRY, 63, 232S - 233S

• Enhanced brain extraction improves the accuracy of brain atrophy estimation.

  Journal article

  Battaglini M. et al, (2008), Neuroimage, 40, 583 - 589

• Relating functional changes during hand movement to clinical parameters in patients with multiple sclerosis in a multi-centre fMRI study.

  Journal article

  Wegner C. et al, (2008), Eur J Neurol, 15, 113 - 122

• Structural and functional abnormalities of the motor system in developmental stuttering.

  Journal article

  Watkins KE. et al, (2008), Brain, 131, 50 - 59

• Changes in white matter microstructure during adolescence.

  Journal article

  Giorgio A. et al, (2008), Neuroimage, 39, 52 - 61

• Independent component analysis of functional magnetic resonance imaging data using wavelet dictionaries

  Conference paper

  Johnson R. et al, (2007), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 4666 LNCS, 625 - 632

• Regional brain atrophy development is related to specific aspects of clinical dysfunction in multiple sclerosis.

  Journal article

  Jasperse B. et al, (2007), Neuroimage, 38, 529 - 537

• Signal and noise characteristics of SSFP FMRI: a comparison with GRE at multiple field strengths.

  Journal article

  Miller KL. et al, (2007), Neuroimage, 37, 1227 - 1236

• New automated brain extraction procedure improves the measurement of brain atrophy on conventional MR images

  Conference paper

  Battaglini M. et al, (2007), MULTIPLE SCLEROSIS, 13, S178 - S178

• Intercenter agreement of brain atrophy measurement in multiple sclerosis patients using manually-edited SIENA and SIENAX.

  Journal article

  Jasperse B. et al, (2007), J Magn Reson Imaging, 26, 881 - 885

• Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia.

  Journal article

  Douaud G. et al, (2007), Brain, 130, 2375 - 2386

• Developmental changes in white matter microstructure in adolescence

  Conference paper

  Giorgio A. et al, (2007), JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 78, 1019 - 1020

• Longitudinal and cross-sectional analysis of atrophy in Alzheimer's disease: cross-validation of BSI, SIENA and SIENAX.

  Journal article

  Smith SM. et al, (2007), Neuroimage, 36, 1200 - 1206

• Discordant white matter N-acetylasparate and diffusion MRI measures suggest that chronic metabolic dysfunction contributes to axonal pathology in multiple sclerosis.

  Journal article

  Cader S. et al, (2007), Neuroimage, 36, 19 - 27

• Triangulating a cognitive control network using diffusion-weighted magnetic resonance imaging (MRI) and functional MRI.

  Journal article

  Aron AR. et al, (2007), J Neurosci, 27, 3743 - 3752

• Relationship between white matter fractional anisotropy and other indices of cerebral health in normal aging: tract-based spatial statistics study of aging.

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  Kochunov P. et al, (2007), Neuroimage, 35, 478 - 487

• Measuring brain atrophy in multiple sclerosis.

  Journal article

  De Stefano N. et al, (2007), J Neuroimaging, 17 Suppl 1, 10S - 15S

• Erratum: Acquisition and voxelwise analysis of multi-subject diffusion data with Tract-Based Spatial Statistics (Nature Protocols (2007) (499-503) 10.1038/nprot.2007.45)

  Journal article

  Smith SM. et al, (2007), Nature Protocols, 2

• Meaningful design and contrast estimability in FMRI.

  Journal article

  Smith S. et al, (2007), Neuroimage, 34, 127 - 136

• Manifestations of early brain recovery associated with abstinence from alcoholism.

  Journal article

  Bartsch AJ. et al, (2007), Brain, 130, 36 - 47

• Integrity of white matter in the corpus callosum correlates with bimanual co-ordination skills.

  Journal article

  Johansen-Berg H. et al, (2007), Neuroimage, 36 Suppl 2, T16 - T21

• Acquisition and voxelwise analysis of multi-subject diffusion data with tract-based spatial statistics.

  Journal article

  Smith SM. et al, (2007), Nat Protoc, 2, 499 - 503

• Factors associated with progression of brain atrophy during ageing: 6 year follow-up from the Austrian stroke prevention study

  Journal article

  Enzinger C. et al, (2006), Research and Practice in Alzheimer's Disease, 11, 227 - 233

• Consistent resting-state networks across healthy subjects.

  Journal article

  Damoiseaux JS. et al, (2006), Proc Natl Acad Sci U S A, 103, 13848 - 13853

• Functional anatomy of interhemispheric cortical connections in the human brain.

  Journal article

  Zarei M. et al, (2006), J Anat, 209, 311 - 320

• Lesion probability maps of white matter hyperintensities in elderly individuals: results of the Austrian stroke prevention study.

  Journal article

  Enzinger C. et al, (2006), J Neurol, 253, 1064 - 1070

• Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data.

  Journal article

  Smith SM. et al, (2006), Neuroimage, 31, 1487 - 1505

• Applying FSL to the FIAC data: model-based and model-free analysis of voice and sentence repetition priming.

  Conference paper

  Beckmann CF. et al, (2006), Hum Brain Mapp, 27, 380 - 391

• Applying FSL to the FIAC data: Model-based and model-free analysis of voice and sentence repetition priming

  Journal article

  Beckmann CF. et al, (2006), Human Brain Mapping, 27, 380 - 391

• A consistent relationship between local white matter architecture and functional specialisation in medial frontal cortex.

  Journal article

  Behrens TE. et al, (2006), Neuroimage, 30, 220 - 227

• fMRI resting state networks define distinct modes of long-distance interactions in the human brain.

  Journal article

  De Luca M. et al, (2006), Neuroimage, 29, 1359 - 1367

• High-resolution FMRI at 1.5T using balanced SSFP.

  Journal article

  Miller KL. et al, (2006), Magn Reson Med, 55, 161 - 170

• Structural and functional brain abnormalities associated with developmental stuttering.

  Conference paper

  Watkins K. et al, (2006), Neuroimage, 31

• A Bayesian cost function applied to model-based registration of sub-cortical brain structures

  Conference paper

  Patenaude B. et al, (2006), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 4057 LNCS, 9 - 17

• Blood oxygenation level dependent contrast resting state networks are relevant to functional activity in the neocortical sensorimotor system.

  Journal article

  De Luca M. et al, (2005), Exp Brain Res, 167, 587 - 594

• Removal of FMRI environment artifacts from EEG data using optimal basis sets.

  Journal article

  Niazy RK. et al, (2005), Neuroimage, 28, 720 - 737

• White matter lesion progression, brain atrophy, and cognitive decline: the Austrian stroke prevention study.

  Journal article

  Schmidt R. et al, (2005), Ann Neurol, 58, 610 - 616

• Ventral striatum/nucleus accumbens activation to smoking-related pictorial cues in smokers and nonsmokers: a functional magnetic resonance imaging study.

  Journal article

  David SP. et al, (2005), Biol Psychiatry, 58, 488 - 494

• A comparison of the tissue classification and the segmentation propagation techniques in MRI brain image segmentation

  Conference paper

  Ren J. et al, (2005), Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 5747, 1682 - 1691

• Metal artifact reduction for CT based on sinusoidal description

  Journal article

  Liu JJ. et al, (2005), Journal of X-Ray Science and Technology, 13, 85 - 96

• Progressive brain tissue loss and reduction of N-acetylaspartate despite immunomodulatory therapy in relapsing-remitting multiple sclerosis: results of a longitudinal single-centre study analysing MR spectroscopic, brain volume and focal tissue changes

  Conference paper

  Enzinger C. et al, (2005), JOURNAL OF NEUROLOGY, 252, 91 - 91

• Evidence for aetiologic heterogeneity of white matter hyperintensities in the elderly: subanalysis of the Austrian Stroke Prevention Study using lesion probability maps

  Conference paper

  Enzinger C. et al, (2005), JOURNAL OF NEUROLOGY, 252, 29 - 29

• Investigations into resting-state connectivity using independent component analysis.

  Journal article

  Beckmann CF. et al, (2005), Philos Trans R Soc Lond B Biol Sci, 360, 1001 - 1013

• Risk factors for progression of brain atrophy in aging: six-year follow-up of normal subjects.

  Journal article

  Enzinger C. et al, (2005), Neurology, 64, 1704 - 1711

• Variability in fMRI: a re-examination of inter-session differences.

  Journal article

  Smith SM. et al, (2005), Hum Brain Mapp, 24, 248 - 257

• Tensorial extensions of independent component analysis for multisubject FMRI analysis.

  Journal article

  Beckmann CF. and Smith SM., (2005), Neuroimage, 25, 294 - 311

• Mixture models with adaptive spatial regularization for segmentation with an application to FMRI data.

  Journal article

  Woolrich MW. et al, (2005), IEEE Trans Med Imaging, 24, 1 - 11

• Reconstruction of computed tomography with metal implants.

  Conference paper

  Liu J. et al, (2005), Conf Proc IEEE Eng Med Biol Soc, 3, 3340 - 3343

• Prioritizing new over old: an fMRI study of the preview search task.

  Journal article

  Olivers CN. et al, (2005), Hum Brain Mapp, 24, 69 - 78

• Functional-anatomical validation and individual variation of diffusion tractography-based segmentation of the human thalamus.

  Journal article

  Johansen-Berg H. et al, (2005), Cereb Cortex, 15, 31 - 39

• A framework for detailed objective comparison of non-rigid registration algorithms in neuroimaging

  Conference paper

  Crum WR. et al, (2004), Lecture Notes in Computer Science, 3216, 679 - 686

• Relating neocortical pathology to disability progression in multiple sclerosis using MRI.

  Journal article

  Chen JT. et al, (2004), Neuroimage, 23, 1168 - 1175

• Interferon beta-1a for brain tissue loss in patients at presentation with syndromes suggestive of multiple sclerosis: a randomised, double-blind, placebo-controlled trial.

  Journal article

  Filippi M. et al, (2004), Lancet, 364, 1489 - 1496

• Changes in connectivity profiles define functionally distinct regions in human medial frontal cortex.

  Journal article

  Johansen-Berg H. et al, (2004), Proc Natl Acad Sci U S A, 101, 13335 - 13340

• A combined longitudinal MRI analysis assessing spectroscopic, brain volume and focal brain tissue changes suggests a limited effect of immunomodulatory agents on the progression of relapsing-remitting multiple sclerosis

  Conference paper

  Enzinger C. et al, (2004), MULTIPLE SCLEROSIS, 10, S223 - S223

• Cerebrovascular risk factors associated with a higher rate of brain atrophy in normal elderly individuals - longitudinal results of the Austrian Stroke Prevention Study

  Conference paper

  Enzinger C. et al, (2004), JOURNAL OF NEUROLOGY, 251, 21 - 22

• Altered cerebellar functional connectivity mediates potential adaptive plasticity in patients with multiple sclerosis.

  Journal article

  Saini S. et al, (2004), J Neurol Neurosurg Psychiatry, 75, 840 - 846

• Multilevel linear modelling for FMRI group analysis using Bayesian inference.

  Journal article

  Woolrich MW. et al, (2004), Neuroimage, 21, 1732 - 1747

• Constrained linear basis sets for HRF modelling using Variational Bayes.

  Journal article

  Woolrich MW. et al, (2004), Neuroimage, 21, 1748 - 1761

• Accelerated evolution of brain atrophy and "black holes" in MS patients with APOE-epsilon 4.

  Journal article

  Enzinger C. et al, (2004), Ann Neurol, 55, 563 - 569

• Distinct portions of anterior cingulate cortex and medial prefrontal cortex are activated by reward processing in separable phases of decision-making cognition.

  Journal article

  Rogers RD. et al, (2004), Biol Psychiatry, 55, 594 - 602

• Probabilistic independent component analysis for functional magnetic resonance imaging.

  Journal article

  Beckmann CF. and Smith SM., (2004), IEEE Trans Med Imaging, 23, 137 - 152

• Fully Bayesian spatio-temporal modeling of FMRI data.

  Journal article

  Woolrich MW. et al, (2004), IEEE Trans Med Imaging, 23, 213 - 231

• The associations of age, cardiovascular morbidity, and plasma homocysteine with brain atrophy in stroke-free, nondemented older adults.

  Conference paper

  Budge MM. et al, (2004), STROKE, 35, 313 - 314

• Overview of fMRI analysis.

  Journal article

  Smith SM., (2004), Br J Radiol, 77 Spec No 2, S167 - S175

• Advances in functional and structural MR image analysis and implementation as FSL.

  Journal article

  Smith SM. et al, (2004), Neuroimage, 23 Suppl 1, S208 - S219

• Potentially adaptive functional changes in cognitive processing for patients with multiple sclerosis and their acute modulation by rivastigmine.

  Journal article

  Parry AM. et al, (2003), Brain, 126, 2750 - 2760

• Characterization and propagation of uncertainty in diffusion-weighted MR imaging.

  Journal article

  Behrens TE. et al, (2003), Magn Reson Med, 50, 1077 - 1088

• General multilevel linear modeling for group analysis in FMRI.

  Journal article

  Beckmann CF. et al, (2003), Neuroimage, 20, 1052 - 1063

• T1 changes detect the progression of pathology in the white matter and cortex of MS patients

  Conference paper

  Palace J. et al, (2003), JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 74, 1179 - 1179

• MRI brain T1 relaxation time changes in MS patients increase over time in both the white matter and the cortex.

  Journal article

  Parry A. et al, (2003), J Neuroimaging, 13, 234 - 239

• Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging.

  Journal article

  Behrens TE. et al, (2003), Nat Neurosci, 6, 750 - 757

• Evidence of early cortical atrophy in MS: relevance to white matter changes and disability.

  Journal article

  De Stefano N. et al, (2003), Neurology, 60, 1157 - 1162

• Towards understanding language organisation in the brain using fMRI.

  Journal article

  Matthews PM. et al, (2003), Hum Brain Mapp, 18, 239 - 247

• On bias in the estimation of autocorrelations for fMRI voxel time-series analysis.

  Journal article

  Marchini JL. and Smith SM., (2003), Neuroimage, 18, 83 - 90

• A description for computed tomography based on sinusoidal curves.

  Journal article

  Liu JJ. et al, (2003), J Xray Sci Technol, 11, 205 - 218

• A method for determining venous contribution to BOLD contrast sensory activation.

  Journal article

  Hall DA. et al, (2002), Magn Reson Imaging, 20, 695 - 706

• Correlation between motor improvements and altered fMRI activity after rehabilitative therapy.

  Journal article

  Johansen-Berg H. et al, (2002), Brain, 125, 2731 - 2742

• Fast robust automated brain extraction.

  Journal article

  Smith SM., (2002), Hum Brain Mapp, 17, 143 - 155

• Effects of word form on brain processing of written Chinese.

  Journal article

  Fu S. et al, (2002), Neuroimage, 17, 1538 - 1548

• Cerebellar responses during anticipation of noxious stimuli in subjects recovered from depression. Functional magnetic resonance imaging study.

  Journal article

  Smith KA. et al, (2002), Br J Psychiatry, 181, 411 - 415

• Testing for dual brain processing routes in reading: a direct contrast of chinese character and pinyin reading using FMRI.

  Journal article

  Chen Y. et al, (2002), J Cogn Neurosci, 14, 1088 - 1098

• Improved optimization for the robust and accurate linear registration and motion correction of brain images.

  Journal article

  Jenkinson M. et al, (2002), Neuroimage, 17, 825 - 841

• Diffuse axonal and tissue injury in patients with multiple sclerosis with low cerebral lesion load and no disability.

  Journal article

  De Stefano N. et al, (2002), Arch Neurol, 59, 1565 - 1571

• White matter and lesion T1 relaxation times increase in parallel and correlate with disability in multiple sclerosis.

  Journal article

  Parry A. et al, (2002), J Neurol, 249, 1279 - 1286

• Accurate, robust, and automated longitudinal and cross-sectional brain change analysis.

  Journal article

  Smith SM. et al, (2002), Neuroimage, 17, 479 - 489

• Imaging attentional modulation of pain in the periaqueductal gray in humans.

  Journal article

  Tracey I. et al, (2002), J Neurosci, 22, 2748 - 2752

• Imaging how attention modulates pain in humans using functional MRI.

  Journal article

  Bantick SJ. et al, (2002), Brain, 125, 310 - 319

• Monitoring disease activity and progression in primary progressive multiple sclerosis using MRI: sub-voxel registration to identify lesion changes and to detect cerebral atrophy.

  Journal article

  Stevenson VL. et al, (2002), J Neurol, 249, 171 - 177

• Longitudinal MRI brain volume changes in non-demented 60-90-year-olds: The associations of age, gender and memory performance

  Conference paper

  Budge MM. et al, (2002), NEUROBIOLOGY OF AGING, 23, S367 - S367

• Evidence for asymmetric frontal-lobe involvement in episodic memory from functional magnetic resonance imaging and patients with unilateral frontal-lobe excisions.

  Journal article

  Lee AC. et al, (2002), Neuropsychologia, 40, 2420 - 2437

• A dynamic brain atlas

  Conference paper

  Hill DLG. et al, (2002), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2488, 532 - 539

• Temporal autocorrelation in univariate linear modeling of FMRI data.

  Journal article

  Woolrich MW. et al, (2001), Neuroimage, 14, 1370 - 1386

• Size-selective neuronal changes in the anterior optic pathways suggest a differential susceptibility to injury in multiple sclerosis.

  Journal article

  Evangelou N. et al, (2001), Brain, 124, 1813 - 1820

• Venous contribution to high magnitude BOLD contrast activation

  Conference paper

  Hall D. et al, (2001), NEUROIMAGE, 13, S143 - S143

• The brain areas underlying visual marking: An event-related fMRI study

  Conference paper

  Olivers C. et al, (2001), NEUROIMAGE, 13, S341 - S341

• Spatio-temporal accuracy of ICA for FMRI

  Conference paper

  Beckmann CF. et al, (2001), NEUROIMAGE, 13, S75 - S75

• SIENA: Single and multiple time point brain atrophy analysis

  Conference paper

  Smith S. et al, (2001), NEUROIMAGE, 13, S250 - S250

• Semantic and phonological processing in Chinese character reading: a fMRI study

  Conference paper

  Fu SM. et al, (2001), NEUROIMAGE, 13, S532 - S532

• Min-Max filter for multi-subject analysis

  Conference paper

  Leibovici DG. and Smith S., (2001), NEUROIMAGE, 13, S183 - S183

• Investigating the intrinsic dimensionality of FMRI data for ICA

  Conference paper

  Beckmann CF. et al, (2001), NEUROIMAGE, 13, S76 - S76

• Imaging the attentional modulation of pain in humans using FMRI

  Conference paper

  Bantick S. et al, (2001), NEUROIMAGE, 13, S298 - S298

• Heirarchical fully Bayesian spatio-temporal analysis of FMRI data

  Conference paper

  Woolrich M. et al, (2001), NEUROIMAGE, 13, S287 - S287

• FSL: New tools for functional and structural brain image analysis

  Conference paper

  Smith S. et al, (2001), NEUROIMAGE, 13, S249 - S249

• Comparison of fMRI with the Wada test for lateralisation of language in pre-surgical epilepsy patients

  Conference paper

  Adcock JE. et al, (2001), NEUROIMAGE, 13, S766 - S766

• An FMRI method to determine specific drug-induced modulations of functional activations using a pharmacokinetic model

  Conference paper

  Wise R. et al, (2001), NEUROIMAGE, 13, S959 - S959

• A statistical framework for automatic brain MR image segmentation

  Conference paper

  Zhang YY. et al, (2001), NEUROIMAGE, 13, S292 - S292

• A parametric approach to Chinese character and pinyin reading using fMRI

  Conference paper

  Fu SM. et al, (2001), NEUROIMAGE, 13, S530 - S530

• A hidden Markov random field model for partial volume classification

  Conference paper

  Zhang YY. et al, (2001), NEUROIMAGE, 13, S291 - S291

• A global optimisation method for robust affine registration of brain images.

  Journal article

  Jenkinson M. and Smith S., (2001), Med Image Anal, 5, 143 - 156

• Normalized accurate measurement of longitudinal brain change.

  Journal article

  Smith SM. et al, (2001), J Comput Assist Tomogr, 25, 466 - 475

• Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

  Journal article

  Zhang Y. et al, (2001), IEEE Trans Med Imaging, 20, 45 - 57

• Nonparametric estimation of temporal autocorrelation in FMRI

  Conference paper

  Woolrich MW. et al, (2000), NeuroImage, 11

• Global optimisation for robust affine registration

  Conference paper

  Jenkinson M. and Smith SM., (2000), NeuroImage, 11

• Combining ICA and GLM: A hybrid approach to FMRI analysis

  Conference paper

  Beckmann CF. et al, (2000), NeuroImage, 11

• Artefact detection in FMRI data using independent component analysis

  Conference paper

  Beckmann CF. et al, (2000), NeuroImage, 11

• Adaptive local reorganisation of primary motor cortex after brain injury

  Conference paper

  Matthews PM. et al, (2000), NeuroImage, 11

• Regional axonal loss in the corpus callosum correlates with cerebral white matter lesion volume and distribution in multiple sclerosis.

  Journal article

  Evangelou N. et al, (2000), Brain, 123 ( Pt 9), 1845 - 1849

• Axonal loss in the optic nerve and tract in multiple sclerosis

  Conference paper

  Esiri M. et al, (2000), BRAIN PATHOLOGY, 10, 643 - 643

• The motor cortex shows adaptive functional changes to brain injury from multiple sclerosis.

  Journal article

  Lee M. et al, (2000), Ann Neurol, 47, 606 - 613

• Relating MRI changes to motor deficit after ischemic stroke by segmentation of functional motor pathways.

  Journal article

  Pineiro R. et al, (2000), Stroke, 31, 672 - 679

• Quantitative pathological evidence for axonal loss in normal appearing white matter in multiple sclerosis.

  Journal article

  Evangelou N. et al, (2000), Ann Neurol, 47, 391 - 395

• A hidden Markov random field model for segmentation of brain MR images

  Conference paper

  Zhang YY. et al, (2000), MEDICAL IMAGING 2000: IMAGE PROCESSING, PTS 1 AND 2, 3979, 1126 - 1137

• Structural brain change analysis

  Conference paper

  Smith SM. and Matthews PM., (1999), NeuroImage, 9

• Robust accurate mid-plane estimation

  Conference paper

  Smith S., (1999), NeuroImage, 9

• Application of lesion probability maps to analysis of the spatio-temporal evolution of the T2-hyperintense lesions of multiple sclerosis (MS)

  Conference paper

  Lee MA. et al, (1999), NeuroImage, 9

• A non-rigid registration algorithm for dynamic breast MR images

  Journal article

  Hayton PM. et al, (1999), Artificial Intelligence, 114, 125 - 156

• Spatial mapping of T2 and gadolinium-enhancing T1 lesion volumes in multiple sclerosis: evidence for distinct mechanisms of lesion genesis?

  Journal article

  Lee MA. et al, (1999), Brain, 122 ( Pt 7), 1261 - 1270

• Accurate robust symmetry estimation

  Conference paper

  Smith S. and Jenkinson M., (1999), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 1679, 308 - 317

• Multi-subject statistic map combination

  Conference paper

  Smith SM. et al, (1998), NeuroImage, 7

• Implicit and explicit memory: fMRI of a pre-learned motor sequence

  Conference paper

  Tracey I. et al, (1998), NeuroImage, 7

• ASSET-2: Real-time motion segmentation and object tracking

  Journal article

  Smith SM., (1998), Real-Time Imaging, 4, 21 - 40

• Defining multiple sclerosis disease activity using MRI T2-weighted difference imaging.

  Journal article

  Lee MA. et al, (1998), Brain, 121 ( Pt 11), 2095 - 2102

• SUSAN - A new approach to low level image processing

  Journal article

  Smith SM. and Brady JM., (1997), International Journal of Computer Vision, 23, 45 - 78

• ASSET-2 - REAL-TIME MOTION SEGMENTATION AND SHAPE TRACKING

  Journal article

  SMITH S. and BRADY J., (1995), IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 17, 814 - 820

• A scene segmenter; visual tracking of moving vehicles

  Journal article

  Smith SM. and Brady JM., (1994), Engineering Applications of Artificial Intelligence, 7, 191 - 204

• Planar region detection and motion recovery

  Journal article

  Sinclair D. et al, (1993), Image and Vision Computing, 11, 229 - 234

• Note on small angle approximations for stereo disparity

  Journal article

  Smith S., (1993), Image and Vision Computing, 11, 395 - 398

Key Publications

• A positive-negative mode of population covariation links brain connectivity, demographics and behavior.

  Journal article

  Smith SM. et al, (2015), Nat Neurosci, 18, 1565 - 1567

• Temporally-independent functional modes of spontaneous brain activity

  Journal article

  Smith SM. et al, (2012), Proceedings of the National Academy of Sciences of the United States of America, 109, 3131 - 3136

• Correspondence of the brain's functional architecture during activation and rest.

  Journal article

  Smith SM. et al, (2009), Proc Natl Acad Sci U S A, 106, 13040 - 13045

• Functional connectomics from resting-state fMRI.

  Journal article

  Smith SM. et al, (2013), Trends Cogn Sci, 17, 666 - 682

• Network modelling methods for FMRI.

  Journal article

  Smith SM. et al, (2011), Neuroimage, 54, 875 - 891

Recent Publications

• Hand classification of fMRI ICA noise components.

  Journal article

  Griffanti L. et al, (2017), Neuroimage, 154, 188 - 205

• Tradeoffs in pushing the spatial resolution of fMRI for the 7T Human Connectome Project.

  Journal article

  T Vu A. et al, (2017), Neuroimage, 154, 23 - 32

• Heterogeneous fractionation profiles of meta-analytic coactivation networks.

  Journal article

  Laird AR. et al, (2017), Neuroimage, 149, 424 - 435

• Studying neuroanatomy using MRI.

  Journal article

  Lerch JP. et al, (2017), Nat Neurosci, 20, 314 - 326

• Accelerating functional MRI using fixed-rank approximations and radial-cartesian sampling.

  Journal article

  Chiew M. et al, (2016), Magn Reson Med, 76, 1825 - 1836